Dev environement¶
Making a fresh dirctory¶
Remote Oxford Server: Made new directory under ./data/lvra_dev (actually a symlink placed in storage).
Made a file to create the directory structure and the database tables. It is different from the
local testing file because I’m not recreating the full LasairOxford severver directory base
code and data or copying the bash scripts under that code base. It already exists here as is.
#!/usr/bin/env bash
years_arr=(2026
2027
2028
2029
2030
2031
2032
2033
2034
2035
)
today=$(date +"%Y%m%d")
today_year=$(date +"%Y")
#mkdir -p "test_$today"
#cd "test_$today"
#mkdir -p data/lvra
#mkdir -p code
cd $LVRA_DATA_ROOT_DEV
work_dir=$(pwd)
mkdir -p JSON
mkdir -p csv
mkdir -p logs
mkdir -p db
for dir in JSON csv logs; do
for year in "${years_arr[@]}"; do
mkdir -p "$work_dir/$dir/$year"
done
mkdir mkdir -p "$work_dir/$dir/$today_year/$today"
done
cd "$work_dir/db"
cat > log_schema.sql <<'SQL'
CREATE TABLE feature_making (
stem TEXT PRIMARY KEY,
timestamp TEXT NOT NULL DEFAULT current_timestamp,
r0b INTEGER
);
CREATE TABLE annotating (
stem TEXT PRIMARY KEY,
timestamp TEXT NOT NULL DEFAULT current_timestamp,
r0b INTEGER
);
CREATE TABLE diaobjid_stems (
diaObjectId INTEGER PRIMARY KEY,
stem TEXT NOT NULL,
timestamp TEXT NOT NULL DEFAULT current_timestamp
);
CREATE TABLE provenance (
ID INTEGER PRIMARY KEY,
diaObjectId INTEGER,
diaSourceId INTEGER,
stem TEXT,
score REAL,
model_name TEXT,
model_version TEXT,
timestamp TEXT NOT NULL DEFAULT current_timestamp
);
CREATE TABLE threshold_flags_provenance(
ID INTEGER PRIMARY KEY,
diaObjectId INTEGER,
diaSourceId INTEGER,
stem TEXT,
n_gt22 INTEGER,
n_gt21 INTEGER,
n_gt20 INTEGER,
n_gt19 INTEGER,
n_gt18 INTEGER,
brighter22 INTEGER,
brighter21 INTEGER,
brighter20 INTEGER,
brighter19 INTEGER,
brighter18 INTEGER,
first22 INTEGER,
first21 INTEGER,
first20 INTEGER,
first19 INTEGER,
first18 INTEGER,
timestamp TEXT NOT NULL DEFAULT current_timestamp
);
CREATE TABLE predict (
stem TEXT PRIMARY KEY,
timestamp TEXT NOT NULL DEFAULT current_timestamp,
r0b INTEGER
);
SQL
sqlite3 log.db < log_schema.sql
Check-list¶
Comment out the cron job
Make fresh dev branch from
mainChange
public_settings.ymlto point to the lasair dev serverChange
r0b_config.ymlso topic out points to dev annotator (and ammend any other relevant settings)MAKE SURE YOUR
lasair83_lvra_feed_fullis the same as the one on prod so we are ingesting same alerts in same formatDo what you need to do
CHECKOUT MAIN AND TURN OUT THE CRON JOB AGAIN
Lasair Virtual Research Assistants